BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H10SP1|AL427836
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1284 1632 0.0
>3x_Contig1284
Length = 6170
Score = 1632 bits (819), Expect = 0.0
Identities = 835/843 (99%), Gaps = 1/843 (0%)
Strand = Plus / Minus
Query: 1 attgtgttgaaagtwttcctttgtcacttttgttattgaatagatatctatttattcact 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3792 attgtgttgaaagttttcctttgtcacttttgttattgaatagatatctatttattcact 3733
Query: 61 atatttgattctttcgtggggagtacgcsgaaatcttaacgtaatatgtsacttttctac 120
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 3732 atatttgattctttcgtggggagtacgccgaaatcttaacgtaatatgtcacttttctac 3673
Query: 121 aagaatccagttgatatagaaatcctatttgatggtgaggattcgagaaaacatgtcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3672 aagaatccagttgatatagaaatcctatttgatggtgaggattcgagaaaacatgtcgag 3613
Query: 181 atccctaccaattctcactcggcaaagagtttatttgataaatatccgttatttgaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3612 atccctaccaattctcactcggcaaagagtttatttgataaatatccgttatttgaagat 3553
Query: 241 ggggagagtgtgactgggcttgtaacactgcgtgtcagagaagggaagaaacttgaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3552 ggggagagtgtgactgggcttgtaacactgcgtgtcagagaagggaagaaacttgaacat 3493
Query: 301 tcaggtatcaaagtttcattgattggtagtattgatacaactggttataacaacgacgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3492 tcaggtatcaaagtttcattgattggtagtattgatacaactggttataacaacgacgtg 3433
Query: 361 aagaataaaaatctagatacctttttgacattaagcatggatttgtgtcctcctggtgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3432 aagaataaaaatctagatacctttttgacattaagcatggatttgtgtcctcctggtgaa 3373
Query: 421 ttagtacattctgttaattacaaattcaactttaaggatgtagaaaaacgatttgaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3372 ttagtacattctgttaattacaaattcaactttaaggatgtagaaaaacgatttgaaagt 3313
Query: 481 tacttgggtaagaacgtatctgtsatgtattatattavagttacaatgataagaaaatcg 540
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 3312 tacttgggtaagaacgtatctgtaatgtattatattaaagttacaatgataagaaaatcg 3253
Query: 541 gctgatatagtaaaattgaagaagttctggtgtcataggtatgctaatgaatcctctatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3252 gctgatatagtaaaattgaagaagttctggtgtcataggtatgctaatgaatcctctatt 3193
Query: 601 aaggataatgagggtaaaccaataaaattagatatcggaattgaaaactgtcttcatata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3192 aaggataatgagggtaaaccaataaaattagatatcggaattgaaaactgtcttcatata 3133
Query: 661 gagttcgaatactcaaaggcacaacacacgttaaaagatgttatagttggaaggatatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3132 gagttcgaatactcaaaggcacaacacacgttaaaagatgttatagttggaaggatatat 3073
Query: 721 tttctgcttaccagattaaaagtaaaacatatgggaattgagtctaatcaaaagggraac 780
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 3072 tttctgcttaccagattaaaagtaaaacatat-ggaattgagtctaatcaaaagggaaac 3014
Query: 781 atgcgggacagaaccaaatcaattgtcagatacgacttcgataagatatgaaatcatggr 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3013 atgcgggacagaaccaaatcaattgtcagatacgacttcgataagatatgaaatcatgga 2954
Query: 841 cgg 843
|||
Sbjct: 2953 cgg 2951
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6832
Number of Sequences: 1807
Number of extensions: 6832
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)